Search A Fasta File

Use a PoPS specificity model to search for potential targets of your protease from a set of proteins in a fasta file.

Please note that results are only kept on the server for 72 hours.

Your email address, where the results will be sent:

The fasta file with the proteins to be analysed (N.B. uploads are limited to 10Mb):

The protease specificity model:

Select the preferred score threshold option:
Note: reasoning tables are limited to the top 5 sites in each protein, regardless of the score threshold. See here for more details.
Set the score threshold value to    (any valid floating point number)
Set the score threshold to the maximum score in each substrate
Set the score threshold to the minimum score (all predictions in each substrate except -Infinity)